Backdoors and Backlash: India in the Fog of Israel–Iran Shadow War

The 12-day war between Iran and Israel, which broke out on June 13, 2025, marked one of the most intense flare-ups in their decades-long rivalry. Israel launched a series of airstrikes targeting Iran’s nuclear and military infrastructure. Iran responded with waves of missile attacks. When the dust settled on June 24 with a U.S.-brokered ceasefire, attention quickly turned to something far more elusive than the damage caused by fighter jets or missiles: espionage. The post-war landscape has exposed how intelligence operations—real or perceived—are reshaping diplomacy and development in West Asia.

In the aftermath, Iranian officials and state-aligned media began floating claims that Indian technology firms might have unwittingly—or perhaps deliberately—assisted Israeli intelligence services. These allegations, centred on the Chabahar Port project and purported data leaks, raise uncomfortable questions about the intersection between infrastructure development, digital surveillance, and geopolitical fault lines. Whether true or not, these accusations have placed India in a diplomatic bind and exposed the growing complexity of intelligence warfare in the Middle East.

Mossad’s Hidden Hand

Israel’s Mossad has long considered Iran one of its top intelligence targets, and over the years, it has built a reputation for bold, high-stakes operations aimed at slowing or sabotaging Iran’s nuclear program. From the assassination of physicist Masoud Ali-Mohammadi in 2010 to the daylight killing of Mohsen Fakhrizadeh in 2020, Israeli operatives have repeatedly shown their reach inside Iran’s borders.

The infamous Stuxnet cyberattack was one of the most sophisticated digital strikes in modern history, crippling Iran’s uranium centrifuges in the late 2000s. That operation signalled a new era: Israeli intelligence had unleashed its digital arsenal.

In a lesser-known yet highly lethal operation, Israeli intelligence reportedly intercepted and weaponised pagers and walkie-talkies supplied by Iran to Hezbollah. In what appeared to be a massive breach, these communication tools—meant to help Hezbollah operatives coordinate—were turned against them. Israeli cyber and signal intelligence units reportedly used embedded vulnerabilities to track, locate, and eliminate Hezbollah operatives, revealing how deeply Israeli eyes can penetrate Iranian-built networks.

By the time of the 2025 war, Mossad’s real-time tracking and targeting of Iranian military commanders suggests that these networks have only grown more sophisticated. Iran’s internal security agencies, already operating under a heavy cloud of suspicion, claimed to have arrested more than 1,000 suspected spies in recent years— an astonishing figure that raises eyebrows.

Tech Trap: Espionage or Misinformation?

In the days following the ceasefire, hardline Iranian outlets, especially the newspaper Kayhan, began publishing stories accusing Indian technology companies of playing a silent role in Israel’s intelligence efforts. The claims were sweeping software backdoors embedded in e-government systems, access to civil registries and military databases, and even communication with Mossad agents via Starlink.

Iranian media narratives suggested that these vulnerabilities were not accidental but part of a larger pattern of Indian-Israeli intelligence cooperation.

Some fact-checking outlets, such as the Indian-based DFRAC have challenged the credibility of these claims, labelling them misinformation. But inside Iran, these accusations have fuelled a new wave of crackdowns, with hundreds arrested on espionage charges. A handful of those detained are reportedly Indian nationals, though independent media reports did not corroborate this information. In a sweeping and punitive measure, Iranian authorities expelled tens of thousands of Afghan refugees, alleging that some of them had been recruited by Israeli intelligence as informants or low-level assets—adding a troubling humanitarian crisis to an already repressive postwar crackdown.

Chabahar’s Shadow: Infrastructure or Intelligence Hub?

Chabahar Port stands at the heart of India’s strategic footprint in Iran, serving as a critical hub in its broader regional connectivity agenda. In May 2024, India signed a 10-year agreement to operate the Shahid Beheshti terminal, pledging $120 million in investments and offering a $250 million line of credit to boost trade routes linking Iran to Afghanistan and Central Asia.

This project brought hundreds—if not thousands—of Indian professionals and contractors into Iran, particularly in the tech and infrastructure sectors. After the 12-day war in June 2025, Iranian security forces reportedly arrested dozens of Indian nationals, many of whom were allegedly connected to projects in Chabahar. Indian officials have remained tight-lipped, while some Indian media reports have labelled the arrests part of a “sweeping and unfounded” crackdown on foreigners.

In the days that followed, 1,800 Indian nationals were evacuated from Tehran and surrounding areas—a move that, while framed as a precaution, only deepened the intrigue. Was India extracting its citizens before things got worse, or was it simply acting responsibly in a volatile environment?

India’s Diplomatic Dance: Balancing Tehran and Tel Aviv

India’s longstanding balancing act in West Asia—deep defence ties with Israel and strategic investments in Iran—is now under mounting strain.

If Iranian officials take these espionage allegations seriously—and media reports from Iransuggest they do—it could jeopardise key projects like Chabahar, which is already a sensitive geopolitical node. Some Iranian lawmakers have reportedly discussed freezing or reviewing the deal with India, although no formal decision has been made.

India’s official neutrality during the 2025 conflict, including its refusal to sign a Shanghai Cooperation Organisation statement condemning Israel, reflects how delicately it is trying to maintain relations on both sides. If Tehran demands a clear stance—or worse, public contrition—India may find itself forced to choose between economic pragmatism and strategic loyalty.

Conclusion

In today’s geopolitical landscape, espionage doesn’t always involve wearing a uniform or carrying a weapon—it may include writing code, building servers, or operating quietly behind a government contract.

Even without hard evidence, the mere perception that Indian tech firms aided Israeli espionage risks serious diplomatic fallout. Such allegations could tarnish their global reputation, prompting governments and businesses to distance themselves over fears of intelligence breaches or hidden affiliations.

Beyond the accusations against Indian firms lies a deeper concern: Iran’s real vulnerability may stem from within. Mossad’s reach suggests significant infiltration of Iran’s own state apparatus, with some operatives allegedly in top government roles—arguably more troubling than any foreign tech link. For India, the challenge is to navigate this minefield carefully. In a climate of rising tensions and digital warfare, transparency and damage control are as vital as trade routes.

 

Mehmet Kılıç
Mehmet Kılıç
As a Researcher at the TRT World Research Centre, he holds a bachelor’s degree in International Relations from Sakarya University. Subsequently, he earned his master’s degree in Comparative Politics of Eurasia at the esteemed National Research University Higher School of Economics in Saint Petersburg, Russia. Currently pursuing a Ph.D. in Middle East Studies at Sakarya University, his research focuses on Iran, Middle East, Russia and Türkiye–Russia relations.

MORE FROM AUTHOR

Iran After Khamenei: Power, Factions, and the IRGC

Welcome to a new episode of the Tipping Point from the TRT World Research Centre. In this episode, we examine the volatile intersection of power,...

After Khamenei: Succession or Succession Crisis?

The joint US-Israeli strike that killed Ayatollah Ali Khamenei has removed a key pillar upon which the Islamic Republic's political and ideological edifice rested....

MORE FROM CURRENT CATEGORY